Histone H3 (di methyl Lys4) Antibody (Rabbit mAb) [G7H21]

CatNo: F1089

    Application: Reactivity:
    • Lane 1: Hela, Lane 2: SH-SY5Y, Lane 3: C6, Lane 4: NIH/3T3
    1/

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    代表番号: 045-509-1970|電子メール:sales@selleck.co.jp

    キーポイント

    WB
    SDS-PAGE の分離ゲルの推奨濃度:20%
    転写条件(ウェット): 200 mA, 60 min 0.22 μm PVDF 膜の使用をお勧めします。

    使用情報

    Dilution
    1:2000
    1:30
    1:800
    1:1000
    1:20 - 1:100
    1:500
    Application
    WB, IP, IHC, IF, FCM, ChIP
    Source
    Rabbit Monoclonal Antibody
    Reactivity
    Mouse, Rat, Chicken, Cow, Human, African green monkey
    Storage Buffer
    PBS, pH 7.2+50% Glycerol+0.05% BSA+0.01% NaN3
    Storage (from the date of receipt)
    -20°C (avoid freeze-thaw cycles), 2 years
    Predicted MW Observed MW
    15 kDa 17 kDa
    *なぜ予測分子量と実際の分子量が異なるのか?
    下記の原因により、実際の分子量が予測と異なる:タンパク質の翻訳後修飾(リン酸化/糖鎖付加),スプライシングバリアント,イソフォーム,相対的な電荷,ポリマー。
    ポジティブコントロール Mouse colon tissue; Human cervical carcinoma tissue; Rat spleen tissue; HepG2 cells; HeLa cells; HT-29 cells; HEK-293 cells; SH-SY5Y cells; C6 cells; L6 cells; NIH/3T3 cells; COS-1 cells; UMNSAH/DF-1 cells; MDBK cells
    ネガティブコントロール

    プロトコール

    WB
    Experimental Protocol:
     
    Sample preparation
    1. Tissue: Lyse the tissue sample by adding an appropriate volume of ice-cold RIPA/Nuclear Lysis Buffer (containing Protease Inhibitor Cocktail),and homogenize the tissue at a low temperature or lyse it by sonication on ice, then incubate on ice for 30 minutes.
    2. Adherent cell: Aspirate the culture medium and wash the cells with ice-cold PBS twice. Lyse the cells by adding an appropriate volume of RIPA/Nuclear Lysis Buffer (containing Protease Inhibitor Cocktail) , sonicate to lyse the cells, and incubate on ice for 30 minutes.
    3. Suspension cell: Transfer the culture medium to a pre-cooled centrifuge tube. Centrifuge and aspirate the supernatant. Wash the cells with ice-cold PBS twice. Lyse the cells by adding an appropriate volume of RIPA/Nuclear Lysis Buffer (containing Protease Inhibitor Cocktail) , sonicate to lyse the cells, and incubate on ice for 30 minutes.
    4. Place the lysate into a pre-cooled microcentrifuge tube. Centrifuge at 4°C for 15 min. Collect the supernatant;
    5. Remove a small volume of lysate to determine the protein concentration;
    6. Combine the lysate with protein loading buffer. Boil 20 µL sample under 95-100°C for 5 min. Centrifuge for 5 min after cool down on ice.
     
    Electrophoretic separation
    1. According to the concentration of extracted protein, load appropriate amount of protein sample and marker onto SDS-PAGE gels for electrophoresis. Recommended separating gel (lower gel) concentration: 20%. Reference Table for Selecting SDS-PAGE Separation Gel Concentrations
    2. Power up 80V for 30 minutes. Then the power supply is adjusted (110 V~150 V), the Marker is observed, and the electrophoresis can be stopped when the indicator band of the predyed protein Marker where the protein is located is properly separated. (Note that the current should not be too large when electrophoresis, too large current (more than 150 mA) will cause the temperature to rise, affecting the result of running glue. If high currents cannot be avoided, an ice bath can be used to cool the bath.)
     
    Transfer membrane
    1. Take out the converter, soak the clip and consumables in the pre-cooled converter;
    2. Activate PVDF membrane with methanol for 1 min and rinse with transfer buffer;
    3. Install it in the order of "black edge of clip - sponge - filter paper - filter paper - glue -PVDF membrane - filter paper - filter paper - sponge - white edge of clip";
    4. The protein was electrotransferred to PVDF membrane. ( 0.22 µm PVDF membrane is recommended )Reference Table for Selecting PVDF Membrane Pore Size Specifications
    Recommended conditions for wet transfer: 200 mA, 60 min.
    ( Note that the transfer conditions can be adjusted according to the protein size. For high-molecular-weight proteins, a higher current and longer transfer time are recommended. However, ensure that the transfer tank remains at a low temperature to prevent gel melting.)
     
    Block
    1. After electrotransfer, wash the film with TBST at room temperature for 5 minutes;
    2. Incubate the film in the blocking solution for 1 hour at room temperature;
    3. Wash the film with TBST for 3 times, 5 minutes each time.
     
    Antibody incubation
    1. Use 5% skim milk powder to prepare the primary antibody working liquid (recommended dilution ratio for primary antibody 1:2000), gently shake and incubate with the film at 4°C overnight;
    2. Wash the film with TBST 3 times, 5 minutes each time;
    3. Add the secondary antibody to the blocking solution and incubate with the film gently at room temperature for 1 hour;
    4. After incubation, wash the film with TBST 3 times for 5 minutes each time.
     
    Antibody staining
    1. Add the prepared ECL luminescent substrate (or select other color developing substrate according to the second antibody) and mix evenly;
    2. Incubate with the film for 1 minute, remove excess substrate (keep the film moist), wrap with plastic film, and expose in the imaging system.
    IF
    Experimental Protocol:
     
    Sample Preparation
    1. Adherent Cells: Place a clean, sterile coverslip in a culture dish. Once the cells grow to near confluence as a monolayer, remove the coverslip for further use.
    2. Suspension Cells: Seed the cells onto a clean, sterile slide coated with poly-L-lysine.
    3. Frozen Sections: Allow the slide to thaw at room temperature. Wash it with pure water or PBS for 2 times, 3 minutes each time.
    4. Paraffin Sections: Deparaffinization and rehydration. Wash the slide with pure water or PBS for 3 times, 3 minutes each time. Then perform antigen retrieval.
     
    Fixation
    1. Fix the cell coverslips/spots or tissue sections at room temperature using a fixative such as 4% paraformaldehyde (4% PFA) for 10-15 minutes.
    2. Wash the sample with PBS for 3 times, 3 minutes each time.
     
    Permeabilization
    1.Add a detergent such as 0.1–0.3% Triton X-100 to the sample and incubate at room temperature for 10–20 minutes.
    (Note: This step is only required for intracellular antigens. For antigens expressed on the cell membrane, this step is unnecessary.)
    Wash the sample with PBS for 3 times, 3 minutes each time.
     
    Blocking
    Add blocking solution and incubate at room temperature for at least 1 hour. (Common blocking solutions include: serum from the same source as the secondary antibody, BSA, or goat serum.)
    Note: Ensure the sample remains moist during and after the blocking step to prevent drying, which can lead to high background.
     
    Immunofluorescence Staining (Day 1)
    1. Remove the blocking solution and add the diluted primary antibody.
    2. Incubate the sample in a humidified chamber at 4°C overnight.
     
    Immunofluorescence Staining (Day 2)
    1. Remove the primary antibody and wash with PBST for 3 times, 5 minutes each time.
    2. Add the diluted fluorescent secondary antibody and incubate in the dark at 4°C for 1–2 hours.
    3. Remove the secondary antibody and wash with PBST for 3 times, 5 minutes each time.
    4. Add diluted DAPI and incubate at room temperature in the dark for 5–10 minutes.
    5. Wash with PBST for 3 times, 5 minutes each time.
     
    Mounting
    1. Mount the sample with an anti-fade mounting medium.
    2. Allow the slide to dry at room temperature overnight in the dark.
    3. Store the slide in a slide storage box at 4°C, protected from light.
     
    IHC
    Experimental Protocol:
     
    Deparaffinization/Rehydration
    1. Deparaffinize/hydrate sections:
    2. Incubate sections in three washes of xylene for 5 min each.
    3. Incubate sections in two washes of 100% ethanol for 10 min each.
    4. Incubate sections in two washes of 95% ethanol for 10 min each.
    5. Wash sections two times in dH2O for 5 min each.
    6.Antigen retrieval: For Citrate: Heat slides in a microwave submersed in 1X citrate unmasking solution until boiling is initiated; continue with 10 min at a sub-boiling temperature (95°-98°C). Cool slides on bench top for 30 min.
     
    Staining
    1. Wash sections in dH2O three times for 5 min each.
    2. Incubate sections in 3% hydrogen peroxide for 10 min.
    3. Wash sections in dH2O two times for 5 min each.
    4. Wash sections in wash buffer for 5 min.
    5. Block each section with 100–400 µl of blocking solution for 1 hr at room temperature.
    6. Remove blocking solution and add 100–400 µl primary antibody diluent in to each section. Incubate overnight at 4°C.
    7. Remove antibody solution and wash sections with wash buffer three times for 5 min each.
    8. Cover section with 1–3 drops HRPas needed. Incubate in a humidified chamber for 30 min at room temperature.
    9. Wash sections three times with wash buffer for 5 min each.
    10. Add DAB Chromogen Concentrate to DAB Diluent and mix well before use.
    11. Apply 100–400 µl DAB to each section and monitor closely. 1–10 min generally provides an acceptable staining intensity.
    12. Immerse slides in dH2O.
    13. If desired, counterstain sections with hematoxylin.
    14. Wash sections in dH2O two times for 5 min each.
    15. Dehydrate sections: Incubate sections in 95% ethanol two times for 10 sec each; Repeat in 100% ethanol, incubating sections two times for 10 sec each; Repeat in xylene, incubating sections two times for 10 sec each.
    16. Mount sections with coverslips and mounting medium.
     

    Datasheet & SDS

    生物学的記述

    Specificity
    Histone H3 (di methyl Lys4) Antibody (Rabbit mAb) [G7H21] detects endogenous levels of total Histone H3 protein only when it is dimethylated at Lys4.
    タンパク質の局在
    染色体、ヌクレオソームコア、細胞核
    Uniprot ID
    P68431
    Clone
    G7H21
    Synonym(s)
    H3FA, HIST1H3A, H3C2, H3FL, HIST1H3B, H3C3, H3C7, H3FI, HIST1H3F, H3C8, H3FH, HIST1H3G, H3C10, H3FK, HIST1H3J, H3C1, H3FC, Histone H3/l, H3K4me2, H3K4me, H3K4
    Background
    Histone H3 (dimethyl Lys4), commonly termed H3K4me2, is a post-translational modification on the N‑terminal tail of core histone H3 that occupies an intermediate state in the H3K4 methylation hierarchy and functions as a chromatin signal linked to active and poised transcription, enhancer activity and tissue-specific regulatory programs. The mark lies on lysine 4 within the flexible histone tail that protrudes from the nucleosome surface, and exists alongside mono- and tri‑methylated forms that together shape distinct chromatin environments; H3K4me2 is deposited primarily by SET1/COMPASS family methyltransferase complexes and removed by demethylases such as LSD1 and JARID1/KDM5 family enzymes, establishing a dynamic methylation–demethylation cycle that responds to developmental and signaling cues. Genome-wide mapping shows that H3K4me2 is enriched over promoters and 5′ transcribed regions of active genes, extending further into gene bodies than H3K4me3, and also marks a large set of enhancers and transcription factor binding regions, where it co-occurs with H3K27ac to delineate robust enhancer–promoter interactions and helps define chromatin loops that connect distal regulatory elements to target genes. Mechanistically, H3K4me2 serves as a docking site for reader proteins containing PHD fingers and other methyl-lysine binding domains, and in mammals it recruits the Set3 HDAC complex to 5′ coding regions, where Set3 deacetylates histones and modulates transcription elongation and nucleosomal turnover, thereby tuning gene expression levels rather than simply switching genes on or off. In enhancer contexts, H3K4me2 distinguishes a class of regulatory elements that are engaged by pluripotency factors and other lineage-determining transcription factors during early development: in vertebrate embryos H3K4me2 marks enhancers bound by Nanog, OCT4/Pou5f3 and Sox19b, and these enhancers become central to maternal-to-zygotic genome activation and the establishment of cell fate–specific transcriptional programs. Tissue-specific profiling reveals that H3K4me2 landscapes differ across organs, with distinct patterns in neural and muscle tissue reflecting its role in controlling genes for neuronal differentiation, synaptic plasticity and myogenesis, and alterations in these patterns in degenerative muscle disease and neurodevelopmental disorders point to mis-regulation of H3K4me2-dependent enhancers and promoter–enhancer communication. In cancer, H3K4 modifications, including H3K4me2, are frequently perturbed through mutations or misexpression of COMPASS methyltransferases and LSD1/KDM5 demethylases; these changes affect chromatin accessibility, transcription factor occupancy and gene expression dynamics in pathways controlling proliferation, apoptosis and differentiation, and H3K4me2 profiles at promoters and enhancers are being explored as biomarkers and as readouts of response to epigenetic therapies targeting H3K4-modifying enzymes. Di‑methylation of histone H3 Lys4 represents a structural feature of nucleosomes that encodes regulatory information about transcriptional activity and potential, integrates with acetylation and other histone marks to organize promoter and enhancer chromatin, and provides a mechanistic handle for researchers investigating gene regulation, developmental transitions, epigenetic dysregulation in disease and related immune pathologies.
    References

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