MSH6 Antibody (Rabbit mAb) [J6H14]

Catalog No.: F5009

    Application: Reactivity:
    • Lane 1: 293T, Lane 2: COLO 205, Lane 3: COS-7, Lane 4: Vero
    1/

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    代表番号: 045-509-1970|電子メール:sales@selleck.co.jp

    キーポイント

    WB
    SDS-PAGE の分離ゲルの推奨濃度:5%

    使用情報

    Dilution
    1:1000
    1:50
    Application
    WB, IF
    Source
    Rabbit Monoclonal Antibody
    Reactivity
    Human, Monkey
    Storage Buffer
    PBS, pH 7.2+50% Glycerol+0.05% BSA+0.01% NaN3
    Storage (from the date of receipt)
    -20°C (avoid freeze-thaw cycles), 2 years
    Predicted MW Observed MW
    153 kDa 160 kDa
    *なぜ予測分子量と実際の分子量が異なるのか?
    下記の原因により、実際の分子量が予測と異なる:タンパク質の翻訳後修飾(リン酸化/糖鎖付加),スプライシングバリアント,イソフォーム,相対的な電荷,ポリマー。
    ポジティブコントロール 293 cells; COLO 205 cells; COS-7 vells; Vero cells
    ネガティブコントロール

    プロトコール

    WB
    Experimental Protocol:
     
    Sample preparation
    1. Tissue: Lyse the tissue sample by adding an appropriate volume of ice-cold RIPA/Nuclear Lysis Buffer (containing Protease Inhibitor Cocktail),and homogenize the tissue at a low temperature or lyse it by sonication on ice, then incubate on ice for 30 minutes.
    2. Adherent cell: Aspirate the culture medium and wash the cells with ice-cold PBS twice. Lyse the cells by adding an appropriate volume of RIPA/Nuclear Lysis Buffer (containing Protease Inhibitor Cocktail) , sonicate to lyse the cells, and incubate on ice for 30 minutes.
    3. Suspension cell: Transfer the culture medium to a pre-cooled centrifuge tube. Centrifuge and aspirate the supernatant. Wash the cells with ice-cold PBS twice. Lyse the cells by adding an appropriate volume of RIPA/Nuclear Lysis Buffer (containing Protease Inhibitor Cocktail) , sonicate to lyse the cells, and incubate on ice for 30 minutes.
    4. Place the lysate into a pre-cooled microcentrifuge tube. Centrifuge at 4°C for 15 min. Collect the supernatant;
    5. Remove a small volume of lysate to determine the protein concentration;
    6. Combine the lysate with protein loading buffer. Boil 20 µL sample under 95-100°C for 5 min. Centrifuge for 5 min after cool down on ice.
     
    Electrophoretic separation
    1. According to the concentration of extracted protein, load appropriate amount of protein sample and marker onto SDS-PAGE gels for electrophoresis. Recommended separating gel (lower gel) concentration: 5%. Reference Table for Selecting SDS-PAGE Separation Gel Concentrations
    2. Power up 80V for 30 minutes. Then the power supply is adjusted (110 V~150 V), the Marker is observed, and the electrophoresis can be stopped when the indicator band of the predyed protein Marker where the protein is located is properly separated. (Note that the current should not be too large when electrophoresis, too large current (more than 150 mA) will cause the temperature to rise, affecting the result of running glue. If high currents cannot be avoided, an ice bath can be used to cool the bath.)
     
    Transfer membrane
    1. Take out the converter, soak the clip and consumables in the pre-cooled converter;
    2. Activate PVDF membrane with methanol for 1 min and rinse with transfer buffer;
    3. Install it in the order of "black edge of clip - sponge - filter paper - filter paper - glue -PVDF membrane - filter paper - filter paper - sponge - white edge of clip";
    4. The protein was electrotransferred to PVDF membrane. ( 0.45 µm PVDF membrane is recommended ) Reference Table for Selecting PVDF Membrane Pore Size Specifications
    Recommended conditions for wet transfer: 200 mA, 120 min.
    ( Note that the transfer conditions can be adjusted according to the protein size. For high-molecular-weight proteins, a higher current and longer transfer time are recommended. However, ensure that the transfer tank remains at a low temperature to prevent gel melting.)
     
    Block
    1. After electrotransfer, wash the film with TBST at room temperature for 5 minutes;
    2. Incubate the film in the blocking solution for 1 hour at room temperature;
    3. Wash the film with TBST for 3 times, 5 minutes each time.
     
    Antibody incubation
    1. Use 5% skim milk powder to prepare the primary antibody working liquid (recommended dilution ratio for primary antibody 1:1000), gently shake and incubate with the film at 4°C overnight;
    2. Wash the film with TBST 3 times, 5 minutes each time;
    3. Add the secondary antibody to the blocking solution and incubate with the film gently at room temperature for 1 hour;
    4. After incubation, wash the film with TBST 3 times for 5 minutes each time.
     
    Antibody staining
    1. Add the prepared ECL luminescent substrate (or select other color developing substrate according to the second antibody) and mix evenly;
    2. Incubate with the film for 1 minute, remove excess substrate (keep the film moist), wrap with plastic film, and expose in the imaging system.
    IF
    Experimental Protocol:
     
    Sample Preparation
    1. Adherent Cells: Place a clean, sterile coverslip in a culture dish. Once the cells grow to near confluence as a monolayer, remove the coverslip for further use.
    2. Suspension Cells: Seed the cells onto a clean, sterile slide coated with poly-L-lysine.
    3. Frozen Sections: Allow the slide to thaw at room temperature. Wash it with pure water or PBS for 2 times, 3 minutes each time.
    4. Paraffin Sections: Deparaffinization and rehydration. Wash the slide with pure water or PBS for 3 times, 3 minutes each time. Then perform antigen retrieval.
     
    Fixation
    1. Fix the cell coverslips/spots or tissue sections at room temperature using a fixative such as 4% paraformaldehyde (4% PFA) for 10-15 minutes.
    2. Wash the sample with PBS for 3 times, 3 minutes each time.
     
    Permeabilization
    1.Add a detergent such as 0.1–0.3% Triton X-100 to the sample and incubate at room temperature for 10–20 minutes.
    (Note: This step is only required for intracellular antigens. For antigens expressed on the cell membrane, this step is unnecessary.)
    Wash the sample with PBS for 3 times, 3 minutes each time.
     
    Blocking
    Add blocking solution and incubate at room temperature for at least 1 hour. (Common blocking solutions include: serum from the same source as the secondary antibody, BSA, or goat serum.)
    Note: Ensure the sample remains moist during and after the blocking step to prevent drying, which can lead to high background.
     
    Immunofluorescence Staining (Day 1)
    1. Remove the blocking solution and add the diluted primary antibody.
    2. Incubate the sample in a humidified chamber at 4°C overnight.
     
    Immunofluorescence Staining (Day 2)
    1. Remove the primary antibody and wash with PBST for 3 times, 5 minutes each time.
    2. Add the diluted fluorescent secondary antibody and incubate in the dark at 4°C for 1–2 hours.
    3. Remove the secondary antibody and wash with PBST for 3 times, 5 minutes each time.
    4. Add diluted DAPI and incubate at room temperature in the dark for 5–10 minutes.
    5. Wash with PBST for 3 times, 5 minutes each time.
     
    Mounting
    1. Mount the sample with an anti-fade mounting medium.
    2. Allow the slide to dry at room temperature overnight in the dark.
    3. Store the slide in a slide storage box at 4°C, protected from light.
     

    Datasheet & SDS

    生物学的記述

    Specificity
    MSH6 Antibody (Rabbit mAb) [J6H14] detects endogenous levels of total MSH6 protein.
    タンパク質の局在
    染色体、細胞核
    Uniprot ID
    P52701
    Clone
    J6H14
    Synonym(s)
    DNA mismatch repair protein Msh6; G/T mismatch-binding protein; GTBP; GTMBP; hMSH6; HNPCC5; HSAP; MSH6; mutS homolog 6; MutS-alpha 160 kDa subunit; p160; sperm-associated protein
    Background
    MSH6 is a MutS family DNA mismatch repair protein that forms the MutSα heterodimer with MSH2 and functions as a primary sensor of base–base mismatches and short insertion–deletion loops in post-replicative chromosomal DNA, linking mismatch recognition to repair and broader DNA damage responses. The protein carries an N‑terminal disordered region containing the PWWP chromatin-binding domain and multiple regulatory motifs, a central mismatch-recognition module with the conserved Phe‑X‑Glu motif that contacts mispaired bases and DNA distortions, and a C‑terminal ATPase domain harboring the Walker A and B motifs that support nucleotide binding and conformational switching within MutSα. MSH6 heterodimerizes with MSH2 to form MutSα, which surveys newly replicated or damaged DNA, recognizes single-base mismatches and small insertion–deletion loops, bends the helix, and shields a short stretch of DNA around the lesion while binding ADP; mismatch engagement triggers ADP–ATP exchange in the ATPase domains, converting MutSα into a sliding clamp that diffuses away from the original site and initiates communication with downstream repair factors. Interaction of ATP-loaded MutSα with MutLα (MLH1–PMS2) and with PCNA coordinates strand discrimination, excision, and resynthesis, and integrates mismatch repair with replication fork-associated processes. The PWWP domain in the MSH6 N terminus binds H3K36me3, recruiting MutSα to actively transcribed chromatin during G1 and early S phase and pre-positioning the complex on DNA that will undergo replication, which allows rapid detection of replication errors and contributes to genome-wide suppression of mutation accumulation. MSH6 functions as the lesion-binding subunit of MutSα and provides specificity toward single-base substitutions and small insertion–deletion events, while MSH2 supplies structural scaffolding and additional DNA-binding elements, and together they also participate in signaling from O⁶‑methylguanine–containing mismatches, promoting a DNA damage response that connects mismatch processing to checkpoint activation and apoptosis. MSH6 also associates with other repair and signaling factors, including Ku70 and related components, placing MutSα at points of crosstalk between mismatch repair, recombination, and double-strand break repair pathways. Germline and somatic pathogenic variants in MSH6 reduce or abolish MutSα function, lead to microsatellite instability and elevated rates of base substitution mutations with a bias toward mononucleotide repeat instability, and underlie a subset of Lynch syndrome (Lynch syndrome 5) and mismatch repair cancer syndrome, with strong associations to colorectal and endometrial carcinomas and a broader spectrum of tumors.
    References

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