Ras (G12D Mutant) Antibody (Rabbit mAb) [C11A12]

Catalog No.: F6955

    Application: Reactivity:
    • Lane 1: PANC1, Lane 2: AsPC1
    1/

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    代表番号: 045-509-1970|電子メール:sales@selleck.co.jp

    キーポイント

    WB
    転写条件(ウェット): 200 mA, 60 min

    使用情報

    Dilution
    1:500-1:3000
    1:25-1:100
    Application
    WB, IHC
    Source
    Rabbit Monoclonal Antibody
    Reactivity
    Human, Mouse
    Storage Buffer
    PBS, pH 7.2+50% Glycerol+0.05% BSA+0.01% NaN3
    Storage (from the date of receipt)
    -20°C (avoid freeze-thaw cycles), 2 years
    Predicted MW Observed MW
    21 kDa 22 kDa
    *なぜ予測分子量と実際の分子量が異なるのか?
    下記の原因により、実際の分子量が予測と異なる:タンパク質の翻訳後修飾(リン酸化/糖鎖付加),スプライシングバリアント,イソフォーム,相対的な電荷,ポリマー。
    ポジティブコントロール Mouse pancreatic tumor cells; Human KRAS G12D mutant pancreatic tumor; AaPC-1 (KFRAS G12D); PANC-1 (KRAS G12D); HPAC(KRAS G12D); HPAF-1(KRAS G12D); SU66.86 (KRAS G12D)
    ネガティブコントロール Normal human pancreas; Normal mouse pancreas; HPDE cells; CFPAC-1(KRAS G12V); HPNE; BaPC3 (KRAS WT); CFPAC1(KRAS G12D); MA PaCa-2 (KRAS G12C)

    プロトコール

    WB
    Experimental Protocol:
     
    Sample preparation
    1. Tissue: Lyse the tissue sample by adding an appropriate volume of ice-cold RIPA/NP-40 Lysis Buffer (containing Protease Inhibitor Cocktail),and homogenize the tissue at a low temperature or lyse it by sonication on ice, then incubate on ice for 30 minutes.
    2. Adherent cell: Aspirate the culture medium and wash the cells with ice-cold PBS twice. Lyse the cells by adding an appropriate volume of RIPA/NP-40 Lysis Buffer (containing Protease Inhibitor Cocktail) , sonicate to lyse the cells, and incubate on ice for 30 minutes.
    3. Suspension cell: Transfer the culture medium to a pre-cooled centrifuge tube. Centrifuge and aspirate the supernatant. Wash the cells with ice-cold PBS twice. Lyse the cells by adding an appropriate volume of RIPA/NP-40 Lysis Buffer (containing Protease Inhibitor Cocktail) , sonicate to lyse the cells, and incubate on ice for 30 minutes.
    4. Place the lysate into a pre-cooled microcentrifuge tube. Centrifuge at 4°C for 15 min. Collect the supernatant;
    5. Remove a small volume of lysate to determine the protein concentration;
    6. Combine the lysate with protein loading buffer. Boil 20 µL sample under 95-100°C for 5 min. Centrifuge for 5 min after cool down on ice.
     
    Electrophoretic separation
    1. According to the concentration of extracted protein, load appropriate amount of protein sample and marker onto SDS-PAGE gels for electrophoresis. Recommended separating gel (lower gel) concentration: 10%. Reference Table for Selecting SDS-PAGE Separation Gel Concentrations
    2. Power up 80V for 30 minutes. Then the power supply is adjusted (110 V~150 V), the Marker is observed, and the electrophoresis can be stopped when the indicator band of the predyed protein Marker where the protein is located is properly separated. (Note that the current should not be too large when electrophoresis, too large current (more than 150 mA) will cause the temperature to rise, affecting the result of running glue. If high currents cannot be avoided, an ice bath can be used to cool the bath.)
     
    Transfer membrane
    1. Take out the converter, soak the clip and consumables in the pre-cooled converter;
    2. Activate PVDF membrane with methanol for 1 min and rinse with transfer buffer;
    3. Install it in the order of "black edge of clip - sponge - filter paper - filter paper - glue -PVDF membrane - filter paper - filter paper - sponge - white edge of clip";
    4. The protein was electrotransferred to PVDF membrane. ( 0.45 µm PVDF membrane is recommended ) Reference Table for Selecting PVDF Membrane Pore Size Specifications
    Recommended conditions for wet transfer: 200 mA, 60 min.
    ( Note that the transfer conditions can be adjusted according to the protein size. For high-molecular-weight proteins, a higher current and longer transfer time are recommended. However, ensure that the transfer tank remains at a low temperature to prevent gel melting.)
     
    Block
    1. After electrotransfer, wash the film with TBST at room temperature for 5 minutes;
    2. Incubate the film in the blocking solution for 1 hour at room temperature;
    3. Wash the film with TBST for 3 times, 5 minutes each time.
     
    Antibody incubation
    1. Use 5% skim milk powder to prepare the primary antibody working liquid (recommended dilution ratio for primary antibody 1:500), gently shake and incubate with the film at 4°C overnight;
    2. Wash the film with TBST 3 times, 5 minutes each time;
    3. Add the secondary antibody to the blocking solution and incubate with the film gently at room temperature for 1 hour;
    4. After incubation, wash the film with TBST 3 times for 5 minutes each time.
     
    Antibody staining
    1. Add the prepared ECL luminescent substrate (or select other color developing substrate according to the second antibody) and mix evenly;
    2. Incubate with the film for 1 minute, remove excess substrate (keep the film moist), wrap with plastic film, and expose in the imaging system.
    IHC
    Experimental Protocol:
     
    Deparaffinization/Rehydration
    1. Deparaffinize/hydrate sections:
    2. Incubate sections in three washes of xylene for 5 min each.
    3. Incubate sections in two washes of 100% ethanol for 10 min each.
    4. Incubate sections in two washes of 95% ethanol for 10 min each.
    5. Wash sections two times in dH2O for 5 min each.
    6.Antigen retrieval: For Citrate: Heat slides in a microwave submersed in 1X citrate unmasking solution until boiling is initiated; continue with 10 min at a sub-boiling temperature (95°-98°C). Cool slides on bench top for 30 min.
     
    Staining
    1. Wash sections in dH2O three times for 5 min each.
    2. Incubate sections in 3% hydrogen peroxide for 10 min.
    3. Wash sections in dH2O two times for 5 min each.
    4. Wash sections in wash buffer for 5 min.
    5. Block each section with 100–400 µl of blocking solution for 1 hr at room temperature.
    6. Remove blocking solution and add 100–400 µl primary antibody diluent in to each section. Incubate overnight at 4°C.
    7. Remove antibody solution and wash sections with wash buffer three times for 5 min each.
    8. Cover section with 1–3 drops HRPas needed. Incubate in a humidified chamber for 30 min at room temperature.
    9. Wash sections three times with wash buffer for 5 min each.
    10. Add DAB Chromogen Concentrate to DAB Diluent and mix well before use.
    11. Apply 100–400 µl DAB to each section and monitor closely. 1–10 min generally provides an acceptable staining intensity.
    12. Immerse slides in dH2O.
    13. If desired, counterstain sections with hematoxylin.
    14. Wash sections in dH2O two times for 5 min each.
    15. Dehydrate sections: Incubate sections in 95% ethanol two times for 10 sec each; Repeat in 100% ethanol, incubating sections two times for 10 sec each; Repeat in xylene, incubating sections two times for 10 sec each.
    16. Mount sections with coverslips and mounting medium.
     

    Datasheet & SDS

    生物学的記述

    Specificity
    Ras (G12D Mutant) Antibody (Rabbit mAb) [C11A12] detects endogenous levels of total Ras (G12D Mutant) protein.
    タンパク質の局在
    細胞膜、細胞質、細胞内膜系
    Uniprot ID
    P01116
    Clone
    C11A12
    Synonym(s)
    GTPase Kras, K-Ras 2, Ki-Ras, c-K-ras, c-Ki-ras, KRAS, KRAS2, RASK2
    Background
    Ras G12D represents an oncogenic mutant form of the small GTPase K‑Ras, a member of the RAS family of guanine nucleotide–binding switches that regulate mitogenic and survival signaling downstream of receptor tyrosine kinases and other upstream cues. The mutation replaces glycine with aspartate at position 12 within the P‑loop of the G‑domain, in close proximity to the nucleotide and catalytic machinery, and alters local side‑chain packing, hydrogen‑bonding, and electrostatic environment so that the catalytic site adopts conformations that no longer support efficient GTP hydrolysis in the presence of GTPase‑activating proteins. The mutant protein maintains the canonical RAS fold with a G‑domain that binds GTP or GDP and a flexible switch I and switch II region that mediate effector recognition, yet the G12D substitution increases the occupancy of active‑state conformations and disrupts key contacts required for transition state stabilization, which stabilizes the GTP‑bound signaling‑competent form and reduces responsiveness to GAP‑catalyzed inactivation. The activated G12D mutant engages Raf kinases through the RAS‑binding domain, initiating the Raf–MEK–ERK cascade that drives transcriptional programs for proliferation and survival, and at the same time couples to PI3K through direct interaction, supporting the PI3K–AKT axis that promotes growth and cell survival. Additional effector pathways that respond to RAS G12D include Ral guanine nucleotide exchange factors and other downstream nodes, providing multiple parallel outputs that reinforce each other to maintain a proliferative, anti‑apoptotic state. Structural analyses of K‑Ras G12D complexes show that the aspartate side chain at position 12 introduces steric and electrostatic clashes near the γ‑phosphate of GTP and the arginine finger of GAPs, explaining the impaired catalytic geometry while preserving high affinity for GTP and GDP, so that the protein cycles poorly back to the GDP‑bound inactive state and accumulates in an on state that is competent for effector binding. This mutant signaling behavior sustains chronic activation of MAPK and PI3K pathways, which increases cell cycle entry, resistance to apoptotic cues, and altered differentiation patterns, and positions KRAS G12D as a dominant driver of tumorigenesis in tissues where RAS pathway input controls epithelial homeostasis. Endogenous expression of oncogenic K‑Ras G12D stimulates proliferation of epithelial cells and expands progenitor compartments through combined input from Raf–MEK–ERK and PI3K–AKT cascades, without requiring additional upstream receptor hyperactivation, and this property distinguishes the mutant from wild‑type RAS, which depends on tightly regulated growth factor signals.
    References

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